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Cofit
Protein
Homologs
Top cofit genes for PS417_22500 from
Pseudomonas simiae WCS417
porin
SEED: Outer membrane porin, OprD family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_21035
multidrug transporter
no
0.57
2
PS417
_27010
threonine dehydratase
0.31
0.49
3
PS417
_25720
anthranilate synthase component II
0.37
0.48
4
PS417
_21125
phosphoadenosine phosphosulfate reductase
no
0.47
5
PS417
_21030
GntR family transcriptional regulator
0.43
0.47
6
PS417
_18560
N-(5'-phosphoribosyl)anthranilate isomerase
0.53
0.46
7
PS417
_25725
anthranilate synthase component I
0.56
0.45
8
PS417
_00185
tryptophan synthase subunit beta
0.57
0.45
9
PS417
_25715
anthranilate phosphoribosyltransferase
0.56
0.45
10
PS417
_25920
pyrroloquinoline quinone biosynthesis protein PqqF
no
0.44
11
PS417
_09725
transporter
no
0.43
12
PS417
_02660
branched-chain amino acid transporter permease subunit LivH
no
0.43
13
PS417
_16990
acyl-CoA dehydrogenase
0.91
0.43
14
PS417
_01355
membrane protein
0.31
0.42
15
PS417
_26740
homoserine acetyltransferase
0.56
0.42
16
PS417
_23805
acetolactate synthase 3 regulatory subunit
0.55
0.42
17
PS417
_01575
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
(from data)
0.55
0.42
18
PS417
_25710
indole-3-glycerol-phosphate synthase
0.54
0.41
19
PS417
_23110
2-isopropylmalate synthase
0.56
0.41
20
PS417
_19685
protein phosphatase
no
0.41
Or look for
negative cofitness