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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF4394 from
Sphingobium sp. HT1-2
Two-component transcriptional response regulator, OmpR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF728
CHAP
no
0.75
2
GFF4527
Type I secretion outer membrane protein, TolC family
no
0.70
3
GFF4127
hypothetical protein
no
0.68
4
GFF1818
Dna binding response regulator PrrA (RegA)
no
0.67
5
GFF1623
hypothetical protein
no
0.66
6
GFF5075
Mobile element protein
no
0.65
7
GFF4947
Glutamate N-acetyltransferase (EC 2.3.1.35) @ N-acetylglutamate synthase (EC 2.3.1.1)
no
0.62
8
GFF1468
hypothetical protein
no
0.62
9
GFF1722
hypothetical protein
no
0.62
10
GFF3207
hypothetical protein
no
0.61
11
GFF4942
hypothetical protein
no
0.61
12
GFF4783
5-oxoprolinase (EC 3.5.2.9), HyuA-like domain / 5-oxoprolinase (EC 3.5.2.9), HyuB-like domain
0.30
0.61
13
GFF5093
hypothetical protein
no
0.61
14
GFF3924
Outer membrane component of multidrug efflux pump
no
0.60
15
GFF3323
Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)
no
0.60
16
GFF4624
Efflux transport system, outer membrane factor (OMF) lipoprotein
0.67
0.60
17
GFF773
dioxygenase, TauD/TfdA family
no
0.59
18
GFF4740
hypothetical protein
no
0.59
19
GFF1099
Type IV secretory pathway, VirD2 components (relaxase)
no
0.59
20
GFF186
hypothetical protein
no
0.59
Or look for
negative cofitness