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  • Top cofit genes for GFF4393 from Variovorax sp. SCN45

    Uncharacterized ABC1 family protein XCC_1720
    SEED: Ubiquinone biosynthesis monooxygenase UbiB
    KEGG: ubiquinone biosynthesis protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5969 Transcriptional regulator, GntR family no 0.74
    2 GFF803 MutT/Nudix family protein no 0.63
    3 GFF312 FIG021862: membrane protein, exporter no 0.63
    4 GFF5995 LysR family transcriptional regulator STM3121 no 0.62
    5 GFF5709 no description no 0.60
    6 GFF6390 GtrA-like protein no 0.58
    7 GFF2516 hypothetical protein no 0.56
    8 GFF5379 Putative hydrolase no 0.54
    9 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake no 0.54
    10 GFF2794 Molybdopterin synthase catalytic subunit MoaE (EC 2.8.1.12) no 0.54
    11 GFF4353 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.53
    12 GFF5012 Citronellol dehydrogenase; Citronellal dehydrogenase 0.26 0.53
    13 GFF251 hypothetical protein no 0.53
    14 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.53
    15 GFF4136 hypothetical protein no 0.52
    16 GFF6417 BUG/TctC family periplasmic protein no 0.52
    17 GFF2531 Transcriptional regulator, AsnC family no 0.52
    18 GFF4547 no description no 0.52
    19 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.51
    20 GFF4169 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.51

    Or look for negative cofitness