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  • Top cofit genes for PS417_22480 from Pseudomonas simiae WCS417

    ferritin
    SEED: Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
    KEGG: starvation-inducible DNA-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11900 conjugal transfer protein TraR 0.22 0.42
    2 PS417_26650 histidine kinase 0.31 0.33
    3 PS417_15265 type VI secretion protein VasK no 0.32
    4 PS417_15260 protein phosphatase no 0.32
    5 PS417_15380 hypothetical protein no 0.31
    6 PS417_27875 histidine kinase no 0.31
    7 PS417_26655 chemotaxis protein 0.57 0.30
    8 PS417_25645 peptidase M23 no 0.30
    9 PS417_23760 DeoR faimly transcriptional regulator no 0.30
    10 PS417_27010 threonine dehydratase 0.66 0.29
    11 PS417_16510 Clp protease ClpX 0.72 0.29
    12 PS417_11845 RpiR family transcriptional regulator no 0.29
    13 PS417_15255 serine/threonine protein kinase no 0.29
    14 PS417_27035 FAD-linked oxidase 0.60 0.29
    15 PS417_06200 protein-PII uridylyltransferase 0.73 0.28
    16 PS417_06370 cold-shock protein 0.57 0.28
    17 PS417_12310 methionine synthase 0.54 0.28
    18 PS417_01395 biofilm formation protein PelB no 0.28
    19 PS417_26645 chemotaxis protein no 0.28
    20 PS417_02435 flagellar motor protein MotA 0.45 0.27

    Or look for negative cofitness