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  • Top cofit genes for PS417_22450 from Pseudomonas simiae WCS417

    ATP-dependent DNA helicase RuvA
    SEED: Holliday junction DNA helicase RuvA
    KEGG: holliday junction DNA helicase RuvA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27870 ATP-dependent DNA helicase RecG 1.00 0.39
    2 PS417_27865 LysR family transcriptional regulator 0.72 0.38
    3 PS417_22445 ATP-dependent DNA helicase RuvB 1.00 0.37
    4 PS417_03830 protein disaggregation chaperone 0.45 0.35
    5 PS417_22895 tyrosine recombinase XerD 0.86 0.35
    6 PS417_19650 chemotaxis protein CheW no 0.34
    7 PS417_19665 flagellar motor protein MotD 0.49 0.34
    8 PS417_01955 peptidase 0.46 0.34
    9 PS417_19690 histidine kinase no 0.33
    10 PS417_18545 cell division protein 0.32 0.33
    11 PS417_20105 glycosyl transferase no 0.33
    12 PS417_19675 chemotaxis protein CheY 0.28 0.33
    13 PS417_19350 GTP cyclohydrolase no 0.33
    14 PS417_05635 membrane protein no 0.32
    15 PS417_19660 cobalamin biosynthesis protein CobQ no 0.32
    16 PS417_20095 hypothetical protein no 0.32
    17 PS417_16490 cell division protein FtsK 0.79 0.32
    18 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.32
    19 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 0.71 0.31
    20 PS417_18540 colicin V production CvpA 0.57 0.31

    Or look for negative cofitness