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    • Top cofit genes for GFF4384 from Variovorax sp. SCN45

    Plasmid replication initiator protein
    SEED: Plasmid replication initiator protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4465 Transcriptional regulator, LysR family no 0.52
    2 GFF2482 Urease accessory protein UreE no 0.49
    3 GFF7049 hypothetical protein no 0.49
    4 GFF17 hypothetical protein no 0.49
    5 GFF4036 hypothetical protein no 0.48
    6 GFF6393 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), C-terminal domain no 0.48
    7 GFF1485 Transcriptional regulator, AraC family no 0.47
    8 GFF2984 Adenosine deaminase (EC 3.5.4.4) no 0.46
    9 GFF4135 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.46
    10 GFF4659 no description no 0.46
    11 GFF3885 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) no 0.45
    12 GFF480 Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) no 0.45
    13 GFF1418 Transcriptional regulator, LysR family no 0.44
    14 GFF633 Urea ABC transporter, ATPase protein UrtD no 0.44
    15 GFF797 no description no 0.44
    16 GFF2993 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases no 0.44
    17 GFF4203 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.43
    18 GFF6083 hypothetical protein PA3071 no 0.43
    19 GFF6486 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) no 0.43
    20 GFF3395 Benzoate ABC transporter, permease protein 2 no 0.43

    Or look for negative cofitness