Top cofit genes for GFF4374 from Variovorax sp. SCN45

UPF0758 family protein
SEED: DNA repair protein RadC
KEGG: DNA repair protein RadC

Rank Hit Name Description Conserved? Cofitness  
1 GFF2153 type IV pili signal transduction protein PilI no 0.63
2 GFF4056 Copper/silver efflux RND transporter, transmembrane protein CusA 0.32 0.63
3 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.62
4 GFF6290 RNA polymerase sigma-54 factor RpoN 0.43 0.60
5 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.59
6 GFF33 Type IV pilus biogenesis protein PilZ no 0.58
7 GFF5414 hypothetical protein no 0.58
8 GFF3743 Twitching motility protein PilT no 0.58
9 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.37 0.58
10 GFF3068 FIG00538108: hypothetical protein no 0.58
11 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.56
12 GFF1954 no description no 0.56
13 GFF2510 Type IV fimbrial assembly, ATPase PilB 0.23 0.56
14 GFF5322 Type IV pilus biogenesis protein PilP no 0.56
15 GFF5321 Type IV pilus biogenesis protein PilO no 0.55
16 GFF5320 Type IV pilus biogenesis protein PilN no 0.55
17 GFF5417 hypothetical protein no 0.55
18 GFF993 Type IV pilus biogenesis protein PilF no 0.55
19 GFF5419 Type IV pilus biogenesis protein PilE no 0.55
20 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.55

Or look for negative cofitness