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  • Top cofit genes for GFF4372 from Variovorax sp. SCN45

    ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
    SEED: ATP-dependent DNA helicase UvrD/PcrA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7158 Pirin no 0.56
    2 GFF421 hypothetical protein no 0.54
    3 GFF7106 BUG/TctC family periplasmic protein no 0.53
    4 GFF1866 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) no 0.53
    5 GFF5687 FIG01027591: hypothetical protein no 0.53
    6 GFF4397 hypothetical protein no 0.53
    7 GFF7162 DNA helicase II related protein no 0.53
    8 GFF48 DNA double-strand break repair protein Mre11 no 0.52
    9 GFF7120 Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB no 0.52
    10 GFF5211 Alkaline phosphatase (EC 3.1.3.1) no 0.51
    11 GFF6391 RfbJ protein no 0.51
    12 GFF259 Bis-ABC ATPase YheS no 0.50
    13 GFF4567 Transcriptional regulator, LysR family no 0.50
    14 GFF5655 Formate dehydrogenase formation protein FdhE no 0.50
    15 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.49
    16 GFF2593 Integral membrane protein no 0.48
    17 GFF1055 Fumarylacetoacetate hydrolase family protein no 0.48
    18 GFF1073 Glutathione S-transferase (EC 2.5.1.18) no 0.48
    19 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.48
    20 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) no 0.48

    Or look for negative cofitness