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Cofit
Protein
Homologs
Top cofit genes for GFF437 from
Variovorax sp. SCN45
Antiholin-like protein LrgA
SEED: Antiholin-like protein LrgA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2833
PKHD-type hydroxylase YbiX
0.24
0.63
2
GFF699
ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.58
3
GFF3227
no description
no
0.57
4
GFF2294
Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
no
0.56
5
GFF439
Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
no
0.53
6
GFF2131
Putative protease
no
0.52
7
GFF1141
Membrane-fusion protein
no
0.52
8
GFF3352
Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1)
no
0.52
9
GFF2414
Cell division protein FtsW
no
0.52
10
GFF6045
FIG00932121: hypothetical protein
no
0.52
11
GFF2190
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
no
0.52
12
GFF7201
Alkanesulfonates transport system permease protein
no
0.51
13
GFF829
Aerobic cobaltochelatase CobN subunit (EC 6.6.1.2)
no
0.51
14
GFF3957
Ribosome small subunit biogenesis RbfA-release protein RsgA
no
0.51
15
GFF134
putative oxidoreductase (AsfA-like), putative L-aspartate oxidase( EC:1.4.3.16 )
no
0.51
16
GFF1289
Sulfate transport system permease protein CysW
no
0.51
17
GFF1415
Lactoylglutathione lyase and related lyases
0.30
0.51
18
GFF6862
Two-component system sensor histidine kinase
no
0.50
19
GFF7021
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
no
0.50
20
GFF6770
2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
no
0.50
Or look for
negative cofitness