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  • Top cofit genes for GFF4365 from Variovorax sp. SCN45

    3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
    SEED: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF801 Murein hydrolase activator NlpD no 0.60
    2 GFF859 Lactoylglutathione lyase (EC 4.4.1.5) no 0.55
    3 GFF329 Nucleoside ABC transporter, ATP-binding protein 0.14 0.53
    4 GFF5728 Methyl-accepting chemotaxis sensor/transducer protein no 0.53
    5 GFF866 no description no 0.52
    6 GFF476 InterPro IPR005134 COGs COG2862 no 0.51
    7 GFF4028 Cytochrome c, class I no 0.51
    8 GFF812 Putative reductase no 0.51
    9 GFF6932 no description no 0.51
    10 GFF7078 no description no 0.50
    11 GFF1279 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.50
    12 GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.50
    13 GFF325 Nucleoside ABC transporter, substrate-binding protein no 0.50
    14 GFF1411 Two-component transcriptional response regulator, LuxR family no 0.48
    15 GFF6808 Peroxiredoxin OsmC (EC 1.11.1.15) no 0.47
    16 GFF3747 putative esterase no 0.47
    17 GFF1074 no description no 0.47
    18 GFF3262 Polymer-forming bactofilin no 0.47
    19 GFF1097 Phosphate regulon transcriptional regulatory protein PhoB (SphR) no 0.46
    20 GFF6344 HipA-like no 0.45

    Or look for negative cofitness