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  • Top cofit genes for PS417_22250 from Pseudomonas simiae WCS417

    pseudouridine synthase
    SEED: Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase B

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_14945 beta-lactamase no 0.37
    2 PS417_00625 taurine dioxygenase no 0.37
    3 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.36
    4 PS417_24230 ATP-dependent protease 0.44 0.36
    5 PS417_19635 lipid kinase no 0.35
    6 PS417_24500 DEAD/DEAH box helicase 0.51 0.35
    7 PS417_03005 arginine decarboxylase 0.38 0.35
    8 PS417_06135 glycerol-3-phosphate acyltransferase no 0.34
    9 PS417_19625 histidine kinase no 0.33
    10 PS417_04290 hypothetical protein 0.41 0.32
    11 PS417_20930 50S rRNA methyltransferase 0.33 0.32
    12 PS417_20585 chemotaxis protein no 0.31
    13 PS417_00635 sulfonate ABC transporter ATP-binding protein no 0.31
    14 PS417_03930 thymidine phosphorylase no 0.30
    15 PS417_25120 capsular biosynthesis protein no 0.30
    16 PS417_14965 transcriptional regulator no 0.29
    17 PS417_25100 hypothetical protein 0.14 0.29
    18 PS417_07120 RNA polymerase sigma-H factor 0.43 0.29
    19 PS417_24705 D-alanyl-D-alanine carboxypeptidase 0.38 0.28
    20 PS417_17205 LysR family transcriptional regulator no 0.28

    Or look for negative cofitness