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  • Top cofit genes for PS417_22230 from Pseudomonas simiae WCS417

    class I peptide chain release factor
    SEED: Hypothetical protein YaeJ with similarity to translation release factor
    KEGG: ribosome-associated protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13425 cupin no 0.59
    2 PS417_12610 RNA polymerase sigma factor no 0.57
    3 PS417_06365 RNA polymerase sigma factor 0.62 0.55
    4 PS417_16070 TonB-dependent receptor no 0.52
    5 PS417_21050 serine acetyltransferase no 0.51
    6 PS417_21040 sulfurylase no 0.50
    7 PS417_11170 aldehyde dehydrogenase no 0.49
    8 PS417_19145 membrane protein 0.16 0.49
    9 PS417_12825 MFS transporter no 0.49
    10 PS417_21045 cysteine synthase 0.47 0.49
    11 PS417_06970 LysR family transcriptional regulator no 0.48
    12 PS417_15335 hypothetical protein 0.33 0.47
    13 PS417_03070 LuxR family transcriptional regulator 0.36 0.46
    14 PS417_15835 universal stress protein no 0.46
    15 PS417_16370 chemotaxis protein CheY 0.24 0.45
    16 PS417_04995 glutathione S-transferase 0.17 0.45
    17 PS417_17515 GfdT protein no 0.45
    18 PS417_28265 pyridoxamine kinase no 0.45
    19 PS417_15565 transketolase no 0.45
    20 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.29 0.44

    Or look for negative cofitness