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  • Top cofit genes for PS417_22190 from Pseudomonas simiae WCS417

    diguanylate cyclase
    SEED: GGDEF domain/EAL domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02210 diguanylate cyclase 0.91 0.76
    2 PS417_19145 membrane protein 0.88 0.67
    3 PS417_07095 histidine kinase 0.79 0.67
    4 PS417_05985 chemotaxis protein CheY 0.89 0.63
    5 PS417_19800 flagellar motor switch protein FliG 0.71 0.63
    6 PS417_19645 chemotaxis protein 0.29 0.63
    7 PS417_18540 colicin V production CvpA 0.82 0.61
    8 PS417_19625 histidine kinase 0.34 0.61
    9 PS417_19805 flagellar M-ring protein FliF 0.69 0.60
    10 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.46 0.60
    11 PS417_19615 chemotaxis protein CheW 0.36 0.59
    12 PS417_03930 thymidine phosphorylase 0.49 0.59
    13 PS417_19630 LuxR family transcriptional regulator 0.68 0.58
    14 PS417_19820 histidine kinase 0.49 0.56
    15 PS417_19675 chemotaxis protein CheY 0.51 0.55
    16 PS417_19660 cobalamin biosynthesis protein CobQ 0.73 0.55
    17 PS417_19620 hypothetical protein no 0.54
    18 PS417_05975 chemotaxis protein CheW no 0.54
    19 PS417_21390 hypothetical protein no 0.53
    20 PS417_26520 amino acid ABC transporter substrate-binding protein 0.89 0.52

    Or look for negative cofitness