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  • Top cofit genes for GFF4333 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5071 AmpG permease no 0.62
    2 GFF3462 Urea ABC transporter, permease protein UrtC no 0.61
    3 GFF3369 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis no 0.61
    4 GFF929 Transcriptional regulator, IclR family no 0.59
    5 GFF3374 no description no 0.57
    6 GFF407 no description no 0.57
    7 GFF3413 Thioredoxin reductase (EC 1.8.1.9) no 0.57
    8 GFF2056 Septum-associated rare lipoprotein A no 0.57
    9 GFF1278 no description no 0.56
    10 GFF6653 Aminotransferase, class III no 0.55
    11 GFF6995 Flagellar M-ring protein FliF no 0.55
    12 GFF6871 FIG00905613: hypothetical protein no 0.55
    13 GFF3705 Amidases related to nicotinamidase no 0.54
    14 GFF373 Probable transmembrane protein no 0.54
    15 GFF4539 no description no 0.53
    16 GFF7034 FIG00538743: hypothetical protein no 0.53
    17 GFF6591 Transcriptional regulator, GntR family no 0.53
    18 GFF3150 Transcriptional regulator, AsnC family no 0.53
    19 GFF3975 Metal-dependent hydrolase no 0.51
    20 GFF2136 Ribokinase (EC 2.7.1.15) no 0.51

    Or look for negative cofitness