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  • Top cofit genes for GFF4331 from Variovorax sp. SCN45

    Oxidoreductase, GMC family
    SEED: Choline dehydrogenase (EC 1.1.99.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6338 no description no 0.53
    2 GFF3187 hypothetical protein no 0.53
    3 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) no 0.48
    4 GFF1801 Transcriptional regulator, LysR family no 0.45
    5 GFF1605 no description no 0.45
    6 GFF4874 Plasmid replication initiator protein no 0.44
    7 GFF681 Hypothetical protein in cluster with At3g50560-like gene family no 0.44
    8 GFF7413 no description no 0.43
    9 GFF3351 FIG00458971: hypothetical protein no 0.43
    10 GFF4244 Acid phosphatase (EC 3.1.3.2) no 0.43
    11 GFF4310 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.43
    12 GFF2655 Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit no 0.43
    13 GFF7201 Alkanesulfonates transport system permease protein no 0.43
    14 GFF4618 Hexuronate utilization operon transcriptional repressor ExuR no 0.42
    15 GFF23 no description no 0.42
    16 GFF860 Cocaine esterase (EC 3.1.1.-) no 0.42
    17 GFF6366 T6SS component TssG (ImpH/VasB) no 0.42
    18 GFF3188 hypothetical protein no 0.42
    19 GFF6208 Cytosine/purine/uracil/thiamine/allantoin permease family protein no 0.41
    20 GFF165 Chromate transport protein ChrA no 0.41

    Or look for negative cofitness