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Cofit
Protein
Homologs
Top cofit genes for GFF433 from
Variovorax sp. SCN45
Flagellar brake protein YcgR
SEED: Inner membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5001
Oxidoreductase, molybdopterin-binding
0.66
0.47
2
GFF7313
hypothetical protein
no
0.46
3
GFF1420
Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)
no
0.46
4
GFF5573
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
no
0.44
5
GFF4374
UPF0758 family protein
no
0.44
6
GFF66
hypothetical protein
no
0.42
7
GFF715
hypothetical protein
no
0.42
8
GFF1835
Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)
no
0.42
9
GFF778
Channel-forming transporter/cytolysins activator of TpsB family
0.67
0.41
10
GFF3343
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4)
no
0.41
11
GFF6699
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.41
12
GFF7237
hypothetical protein
no
0.40
13
GFF5534
Queuine tRNA-ribosyltransferase (EC 2.4.2.29)
no
0.40
14
GFF2038
ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate)
no
0.40
15
GFF327
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)
no
0.39
16
GFF4056
Copper/silver efflux RND transporter, transmembrane protein CusA
no
0.39
17
GFF396
hypothetical protein
no
0.39
18
GFF2669
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
no
0.38
19
GFF698
Transcriptional regulator, LysR family
no
0.38
20
GFF4623
Transcriptional regulator, AcrR family
no
0.38
Or look for
negative cofitness