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  • Top cofit genes for GFF4322 from Sphingobium sp. HT1-2

    RepA
    SEED: plasmid replication initiator protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4857 hypothetical protein no 0.73
    2 GFF4229 hypothetical protein no 0.73
    3 GFF271 hypothetical protein no 0.72
    4 GFF4675 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) no 0.72
    5 GFF5237 Acetate kinase (EC 2.7.2.1) no 0.69
    6 GFF1007 hypothetical protein no 0.68
    7 GFF4254 hypothetical protein no 0.67
    8 GFF1589 hypothetical protein no 0.67
    9 GFF3684 Phosphate transport regulator (distant homolog of PhoU) no 0.66
    10 GFF4198 Uronate isomerase (EC 5.3.1.12) no 0.66
    11 GFF2456 hypothetical protein no 0.66
    12 GFF4360 hypothetical protein no 0.66
    13 GFF4074 Similar to hypothetical protein DUF454 no 0.66
    14 GFF4631 hypothetical protein no 0.66
    15 GFF917 hypothetical protein no 0.66
    16 GFF3944 General stress protein no 0.66
    17 GFF4679 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.66
    18 GFF4995 similar to partitioning protein no 0.65
    19 GFF4681 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.65
    20 GFF1487 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.65

    Or look for negative cofitness