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Cofit
Protein
Homologs
Top cofit genes for GFF4322 from
Sphingobium sp. HT1-2
RepA
SEED: plasmid replication initiator protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4857
hypothetical protein
no
0.73
2
GFF4229
hypothetical protein
no
0.73
3
GFF271
hypothetical protein
no
0.72
4
GFF4675
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
no
0.72
5
GFF5237
Acetate kinase (EC 2.7.2.1)
no
0.69
6
GFF1007
hypothetical protein
no
0.68
7
GFF4254
hypothetical protein
no
0.67
8
GFF1589
hypothetical protein
no
0.67
9
GFF3684
Phosphate transport regulator (distant homolog of PhoU)
no
0.66
10
GFF4198
Uronate isomerase (EC 5.3.1.12)
no
0.66
11
GFF2456
hypothetical protein
no
0.66
12
GFF4360
hypothetical protein
no
0.66
13
GFF4074
Similar to hypothetical protein DUF454
no
0.66
14
GFF4631
hypothetical protein
no
0.66
15
GFF917
hypothetical protein
no
0.66
16
GFF3944
General stress protein
no
0.66
17
GFF4679
Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily
no
0.66
18
GFF4995
similar to partitioning protein
no
0.65
19
GFF4681
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
no
0.65
20
GFF1487
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.65
Or look for
negative cofitness