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  • Top cofit genes for GFF4321 from Variovorax sp. SCN45

    Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7 no description no 0.64
    2 GFF5135 DNA repair exonuclease family protein YhaO no 0.61
    3 GFF5918 T6SS component TssC (ImpC/VipB) no 0.54
    4 GFF4300 Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) / conserved protein associated with acetyl-CoA C-acyltransferase no 0.53
    5 GFF681 Hypothetical protein in cluster with At3g50560-like gene family no 0.51
    6 GFF6602 Type IV secretory pathway, protease TraF no 0.51
    7 GFF1602 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) no 0.51
    8 GFF7308 Uncharacterized MFS-type transporter no 0.50
    9 GFF3557 hypothetical protein no 0.50
    10 GFF4668 hypothetical protein no 0.50
    11 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.50
    12 GFF6576 Conjugative transfer protein TrbE no 0.50
    13 GFF2469 hypothetical protein no 0.49
    14 GFF2487 Two-component system sensor histidine kinase/response regulator hybrid no 0.48
    15 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.48
    16 GFF5776 Gluconokinase (EC 2.7.1.12) no 0.48
    17 GFF4858 Transposase no 0.48
    18 GFF1439 putative inositol monophosphatase no 0.48
    19 GFF5657 Formate dehydrogenase O beta subunit (EC 1.2.1.2) no 0.47
    20 GFF1811 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.47

    Or look for negative cofitness