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Cofit
Protein
Homologs
Top cofit genes for GFF4321 from
Variovorax sp. SCN45
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7
no description
no
0.64
2
GFF5135
DNA repair exonuclease family protein YhaO
no
0.61
3
GFF5918
T6SS component TssC (ImpC/VipB)
no
0.54
4
GFF4300
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) / conserved protein associated with acetyl-CoA C-acyltransferase
no
0.53
5
GFF681
Hypothetical protein in cluster with At3g50560-like gene family
no
0.51
6
GFF6602
Type IV secretory pathway, protease TraF
no
0.51
7
GFF1602
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.51
8
GFF7308
Uncharacterized MFS-type transporter
no
0.50
9
GFF3557
hypothetical protein
no
0.50
10
GFF4668
hypothetical protein
no
0.50
11
GFF72
D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-)
no
0.50
12
GFF6576
Conjugative transfer protein TrbE
no
0.50
13
GFF2469
hypothetical protein
no
0.49
14
GFF2487
Two-component system sensor histidine kinase/response regulator hybrid
no
0.48
15
GFF4925
ATPase component BioM of energizing module of biotin ECF transporter
no
0.48
16
GFF5776
Gluconokinase (EC 2.7.1.12)
no
0.48
17
GFF4858
Transposase
no
0.48
18
GFF1439
putative inositol monophosphatase
no
0.48
19
GFF5657
Formate dehydrogenase O beta subunit (EC 1.2.1.2)
no
0.47
20
GFF1811
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.47
Or look for
negative cofitness