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Cofit
Protein
Homologs
Top cofit genes for PS417_22125 from
Pseudomonas simiae WCS417
porin
SEED: Glucose-selective porin OprB
KEGG: porin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_10925
malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18)
(from data)
no
0.58
2
PS417
_09540
penicillin-binding protein 2
0.36
0.57
3
PS417
_11850
5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29)
(from data)
0.23
0.54
4
PS417
_16005
ATPase
0.50
0.53
5
PS417
_22780
XRE family transcriptional regulator
0.31
0.51
6
PS417
_26230
electron transfer flavoprotein subunit alpha
0.37
0.51
7
PS417
_26235
(Fe-S)-binding protein
0.40
0.51
8
PS417
_10920
LysR family transcriptional regulator
no
0.49
9
PS417
_22135
glucose/xylose ABC transporter, permease component 1
(from data)
0.70
0.49
10
PS417
_11870
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22)
(from data)
0.35
0.48
11
PS417
_04270
ribonuclease G
0.26
0.48
12
PS417
_11895
Inositol transport system permease protein
(from data)
0.21
0.48
13
PS417
_11890
Inositol transport system ATP-binding protein
(from data)
0.20
0.48
14
PS417
_26250
peptidase M19
0.24
0.48
15
PS417
_12435
hypothetical protein
no
0.47
16
PS417
_22130
glucose/xylose ABC transporter, ATPase component
(from data)
0.72
0.47
17
PS417
_23910
3-methyl-2-oxobutanoate hydroxymethyltransferase
no
0.47
18
PS417
_22775
histidine kinase
0.30
0.47
19
PS417
_26225
electron transfer flavoprotein subunit beta
0.38
0.46
20
PS417
_27535
chemotaxis protein CheY
no
0.46
Or look for
negative cofitness