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Cofit
Protein
Homologs
Top cofit genes for PS417_22120 from
Pseudomonas simiae WCS417
aldose epimerase
SEED: Aldose 1-epimerase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_11895
Inositol transport system permease protein
(from data)
0.40
0.30
2
PS417
_11850
5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29)
(from data)
no
0.29
3
PS417
_11870
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22)
(from data)
no
0.29
4
PS417
_11890
Inositol transport system ATP-binding protein
(from data)
no
0.27
5
PS417
_17510
histidine kinase
no
0.27
6
PS417
_02680
hypothetical protein
no
0.27
7
PS417
_10925
malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18)
(from data)
0.60
0.26
8
PS417
_09540
penicillin-binding protein 2
no
0.25
9
PS417
_11855
Myo-inosose-2 dehydratase (EC 4.2.1.44)
(from data)
0.29
0.25
10
PS417
_22125
porin
0.21
0.25
11
PS417
_11885
Inositol transport system sugar-binding protein
(from data)
no
0.25
12
PS417
_11860
5-deoxy-D-glucuronate isomerase (EC 5.3.1.30)
(from data)
no
0.24
13
PS417
_14195
magnesium ABC transporter ATPase
no
0.24
14
PS417
_04275
hypothetical protein
no
0.24
15
PS417
_11865
xylose isomerase
no
0.23
16
PS417
_10920
LysR family transcriptional regulator
no
0.22
17
PS417
_12325
precorrin-4 C11-methyltransferase
no
0.22
18
PS417
_26000
8-amino-7-oxononanoate synthase
0.84
0.21
19
PS417
_13805
4-amino-4-deoxy-L-arabinose transferase
no
0.21
20
PS417
_17780
Ais protein
no
0.20
Or look for
negative cofitness