• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_22115 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Phosphogluconate repressor HexR, RpiR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_07640 glyceraldehyde-3-phosphate dehydrogenase 0.82 0.38
    2 PS417_19965 histidine kinase 0.50 0.29
    3 PS417_26040 malate synthase 0.59 0.27
    4 PS417_01950 malate dehydrogenase 0.73 0.27
    5 PS417_27345 sn-glycerol-3-phosphate transporter 0.26 0.26
    6 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE no 0.24
    7 PS417_05840 LuxR family transcriptional regulator 0.38 0.24
    8 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein no 0.23
    9 PS417_08390 transcription elongation factor GreB 0.59 0.23
    10 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.24 0.23
    11 PS417_20595 hypothetical protein no 0.22
    12 PS417_01885 poly(3-hydroxyalkanoate) granule-associated protein PhaF no 0.22
    13 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC no 0.22
    14 PS417_05570 DeoR faimly transcriptional regulator 0.82 0.22
    15 PS417_16570 isocitrate lyase 0.49 0.21
    16 PS417_21750 acetyl-CoA synthetase 0.75 0.21
    17 PS417_17420 ethanol oxidation regulatory protein ercA (from data) no 0.21
    18 PS417_17450 amino acid ABC transporter substrate-binding protein no 0.21
    19 PS417_04365 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.71 0.21
    20 PS417_19075 ABC transporter ATP-binding protein no 0.21

    Or look for negative cofitness