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  • Top cofit genes for GFF4316 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer pilus assembly protein TraL
    SEED: IncF plasmid conjugative transfer pilus assembly protein TraL
    KEGG: conjugal transfer pilus assembly protein TraL

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1347 hypothetical protein no 0.72
    2 GFF4983 hypothetical protein no 0.70
    3 GFF2762 4-hydroxybenzoate transporter no 0.68
    4 GFF4002 hypothetical protein no 0.67
    5 GFF4926 hypothetical protein no 0.66
    6 GFF1378 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) no 0.66
    7 GFF907 Uncharacterized MFS-type transporter no 0.64
    8 GFF2589 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) no 0.63
    9 GFF2202 hypothetical protein no 0.63
    10 GFF260 hypothetical protein no 0.62
    11 GFF4937 putative 3-oxoacyl-[acyl-carrier-protein] reductase no 0.62
    12 GFF4175 hypothetical protein no 0.62
    13 GFF3006 hypothetical protein no 0.62
    14 GFF918 hypothetical protein no 0.61
    15 GFF3073 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C no 0.59
    16 GFF2665 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) no 0.58
    17 GFF206 hypothetical protein no 0.58
    18 GFF2517 tRNA-Arg-CCT no 0.58
    19 GFF909 transcriptional regulator, MarR family no 0.58
    20 GFF4383 hypothetical protein no 0.56

    Or look for negative cofitness