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  • Top cofit genes for GFF4307 from Sphingobium sp. HT1-2

    Conjugative signal peptidase TrhF
    SEED: Conjugative signal peptidase TrhF
    KEGG: conjugal transfer pilin signal peptidase TrbI

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3988 hypothetical protein no 0.75
    2 GFF1508 Protein-tyrosine kinase (EC 2.7.1.112) no 0.74
    3 GFF1983 Type II/IV secretion system protein TadC, associated with Flp pilus assembly no 0.74
    4 GFF826 Cobalamin synthase (EC 2.7.8.26) no 0.72
    5 GFF3720 Flagellar protein FlgJ [peptidoglycan hydrolase] no 0.70
    6 GFF3956 hypothetical protein no 0.69
    7 GFF3336 Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2) no 0.69
    8 GFF1759 alpha-galactosidase (EC 3.2.1.22) no 0.69
    9 GFF1237 Transcriptional regulator, TetR family no 0.67
    10 GFF1428 hypothetical protein no 0.67
    11 GFF4964 Hydrolase, alpha/beta fold family no 0.67
    12 GFF2052 Phosphoserine phosphatase (EC 3.1.3.3) no 0.67
    13 GFF1547 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.66
    14 GFF216 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), N-terminal domain no 0.65
    15 GFF3721 Flagellar biosynthesis protein FlhA no 0.64
    16 GFF3731 Flagellum-specific ATP synthase FliI no 0.64
    17 GFF4436 hypothetical protein no 0.64
    18 GFF3665 hypothetical protein no 0.64
    19 GFF1627 Tryptophan synthase alpha chain (EC 4.2.1.20) no 0.63
    20 GFF1490 Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17) no 0.63

    Or look for negative cofitness