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  • Top cofit genes for GFF4303 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer protein TrbC
    SEED: IncF plasmid conjugative transfer protein TrbC
    KEGG: conjugal transfer pilus assembly protein TrbC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4048 hypothetical protein no 0.80
    2 GFF876 Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family no 0.78
    3 GFF2993 Two-component system sensor histidine kinase SMc02367 no 0.76
    4 GFF2229 Mannonate dehydratase (EC 4.2.1.8) no 0.74
    5 GFF4912 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) no 0.74
    6 GFF4879 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.74
    7 GFF3465 Excinuclease ABC subunit C no 0.73
    8 GFF1165 hypothetical protein no 0.73
    9 GFF2071 hypothetical protein no 0.72
    10 GFF4763 SAM-dependent methyltransferase no 0.72
    11 GFF2346 Hydrolase, haloacid delahogenase-like family no 0.71
    12 GFF3903 16 kDa heat shock protein A no 0.70
    13 GFF3488 Hydrolase, alpha/beta fold family no 0.69
    14 GFF4446 TonB-dependent receptor no 0.69
    15 GFF5082 Short-chain dehydrodenase (gene dltE) no 0.69
    16 GFF1129 hypothetical protein no 0.69
    17 GFF2203 SWI/SNF family helicase no 0.68
    18 GFF1191 TonB-dependent receptor no 0.67
    19 GFF4260 Single-stranded DNA-binding protein no 0.67
    20 GFF2884 FIG037995: Hypothetical protein no 0.66

    Or look for negative cofitness