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  • Top cofit genes for PS417_22025 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulators, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_10340 alcohol dehydrogenase no 0.21
    2 PS417_00405 DNA polymerase I 0.49 0.19
    3 PS417_13280 TonB-dependent receptor no 0.19
    4 PS417_26630 transcriptional regulator no 0.19
    5 PS417_14865 GntR family transcriptional regulator no 0.18
    6 PS417_15440 iron ABC transporter substrate-binding protein no 0.18
    7 PS417_12190 microcin ABC transporter ATP-binding protein no 0.18
    8 PS417_15280 type VI secretion protein no 0.18
    9 PS417_00385 Fur family transcriptional regulator no 0.17
    10 PS417_27215 hypothetical protein no 0.17
    11 PS417_16785 ABC transporter permease no 0.17
    12 PS417_11235 hypothetical protein no 0.17
    13 PS417_21385 hypothetical protein no 0.16
    14 PS417_13950 LuxR family transcriptional regulator no 0.16
    15 PS417_06205 methionine aminopeptidase no 0.16
    16 PS417_12315 peptidylprolyl isomerase no 0.16
    17 PS417_19690 histidine kinase no 0.16
    18 PS417_06845 lipoprotein no 0.16
    19 PS417_05635 membrane protein no 0.15
    20 PS417_00755 biofilm PGA synthesis protein PgaD no 0.15

    Or look for negative cofitness