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  • Top cofit genes for GFF4300 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer pilus assembly protein TraF
    SEED: IncF plasmid conjugative transfer pilus assembly protein TraF
    KEGG: conjugal transfer pilus assembly protein TraF

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4809 hypothetical protein no 0.79
    2 GFF1076 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.77
    3 GFF3987 hypothetical protein no 0.77
    4 GFF4838 Intracellular protease no 0.76
    5 GFF5010 Protein formerly called heavy metal resistance transcriptional regulator HmrR no 0.75
    6 GFF2582 Periplasmic divalent cation tolerance protein CutA no 0.75
    7 GFF5058 hypothetical protein no 0.73
    8 GFF40 Glycosyltransferase no 0.73
    9 GFF3285 ABC transporter, ATP-binding protein no 0.72
    10 GFF2730 Hexuronate transporter no 0.72
    11 GFF898 hypothetical protein no 0.71
    12 GFF1731 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) @ 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) no 0.71
    13 GFF2406 Xylan 1,4-beta-xylosidase (EC 3.2.1.37) no 0.70
    14 GFF422 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.70
    15 GFF1513 hypothetical protein no 0.69
    16 GFF3196 hypothetical protein no 0.69
    17 GFF3773 hypothetical protein no 0.69
    18 GFF2740 Diaminobutyrate--2-oxoglutarate transaminase (EC 2.6.1.76) no 0.69
    19 GFF598 Protein-disulfide isomerase no 0.69
    20 GFF4450 CopG protein no 0.69

    Or look for negative cofitness