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  • Top cofit genes for GFF4299 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer pilus assembly protein TraH
    SEED: IncF plasmid conjugative transfer pilus assembly protein TraH
    KEGG: conjugative transfer pilus assembly protein TraH

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF789 Lycopene cyclase no 0.84
    2 GFF2673 Pirin-like protein CC_1473 no 0.81
    3 GFF3414 FIG018171: hypothetical protein of Cupin superfamily no 0.76
    4 GFF2457 hypothetical protein no 0.75
    5 GFF3670 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) no 0.74
    6 GFF1 hypothetical protein no 0.74
    7 GFF353 Acid phosphatase (EC 3.1.3.2) no 0.72
    8 GFF5035 Fructokinase (EC 2.7.1.4) no 0.71
    9 GFF3456 pyridoxal-phosphate dependent enzyme family protein no 0.70
    10 GFF180 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) no 0.70
    11 GFF3248 putative transglycosylase associated gene no 0.69
    12 GFF2549 TonB-dependent receptor no 0.69
    13 GFF917 hypothetical protein no 0.68
    14 GFF505 Plasmid stabilization system no 0.68
    15 GFF218 Transcriptional regulator, ArsR family / Methyltransferase fusion no 0.68
    16 GFF2786 FIG00983463: hypothetical protein no 0.67
    17 GFF271 hypothetical protein no 0.67
    18 GFF3778 DNA polymerase I (EC 2.7.7.7) no 0.67
    19 GFF2976 RND efflux system, membrane fusion protein no 0.67
    20 GFF581 Aminopeptidase N no 0.66

    Or look for negative cofitness