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  • Top cofit genes for GFF4297 from Variovorax sp. SCN45

    2-ketocyclohexanecarboxyl-CoA hydrolase
    SEED: Naphthoate synthase (EC 4.1.3.36)
    KEGG: 2-ketocyclohexanecarboxyl-CoA hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF378 RNA (nucleoside 2'-O)-methyltransferase no 0.56
    2 GFF6573 Conjugative transfer protein TrbF no 0.54
    3 GFF2819 Phosphoenolpyruvate synthase regulatory protein no 0.47
    4 GFF4497 FIG027115: Membrane protein no 0.46
    5 GFF3238 no description no 0.45
    6 GFF6540 FIG00994002: hypothetical protein no 0.45
    7 GFF6923 Acetate permease ActP (cation/acetate symporter) no 0.44
    8 GFF6366 T6SS component TssG (ImpH/VasB) no 0.43
    9 GFF6241 Transglutaminase-like domain no 0.42
    10 GFF1128 Alkyl hydroperoxide reductase subunit C-like protein no 0.42
    11 GFF4688 Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC no 0.42
    12 GFF6848 Biopolymer transport protein ExbD/TolR no 0.41
    13 GFF1582 BUG/TctC family periplasmic protein no 0.41
    14 GFF6217 hypothetical protein no 0.41
    15 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.41
    16 GFF1966 Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE no 0.40
    17 GFF5107 Transcriptional regulator, LysR family no 0.40
    18 GFF6104 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) 0.44 0.40
    19 GFF7060 BUG/TctC family periplasmic protein no 0.39
    20 GFF1110 Recombination protein RecR no 0.39

    Or look for negative cofitness