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  • Top cofit genes for PS417_21975 from Pseudomonas simiae WCS417

    glutamate-pyruvate aminotransferase
    SEED: Uncharacterized PLP-dependent aminotransferase YfdZ
    KEGG: alanine-synthesizing transaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19615 chemotaxis protein CheW no 0.42
    2 PS417_18570 peptidoglycan-binding protein no 0.42
    3 PS417_20690 chemotaxis protein 0.30 0.41
    4 PS417_20090 DegT/DnrJ/EryC1/StrS aminotransferase no 0.40
    5 PS417_19820 histidine kinase 0.46 0.39
    6 PS417_19675 chemotaxis protein CheY no 0.39
    7 PS417_24905 DNA-binding protein 0.21 0.38
    8 PS417_20095 hypothetical protein no 0.38
    9 PS417_19645 chemotaxis protein 0.34 0.36
    10 PS417_19625 histidine kinase no 0.36
    11 PS417_20100 hypothetical protein no 0.36
    12 PS417_20105 glycosyl transferase no 0.36
    13 PS417_21580 chemotaxis protein CheW 0.46 0.35
    14 PS417_19800 flagellar motor switch protein FliG 0.52 0.35
    15 PS417_19655 chemotaxis protein CheW 0.62 0.34
    16 PS417_19660 cobalamin biosynthesis protein CobQ 0.46 0.34
    17 PS417_19765 flagellar hook-length control protein no 0.34
    18 PS417_19805 flagellar M-ring protein FliF 0.58 0.34
    19 PS417_21595 flagellar biosynthesis protein FlgN no 0.33
    20 PS417_18705 succinate dehydrogenase no 0.33

    Or look for negative cofitness