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Cofit
Protein
Homologs
Top cofit genes for GFF4291 from
Variovorax sp. SCN45
Putative oxidoreductase YncB
SEED: Putative oxidoreductase YncB
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7266
L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16)
no
0.61
2
GFF2772
Site-specific tyrosine recombinase XerD
no
0.58
3
GFF3847
LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24)
no
0.55
4
GFF2196
no description
no
0.55
5
GFF1702
hypothetical protein
no
0.54
6
GFF2594
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
no
0.53
7
GFF4814
Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism
no
0.53
8
GFF2405
Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12)
no
0.52
9
GFF2437
hypothetical protein
no
0.52
10
GFF653
no description
no
0.52
11
GFF324
Uracil phosphoribosyltransferase (EC 2.4.2.9)
no
0.52
12
GFF6554
Putative ATP/GTP-binding protein
no
0.52
13
GFF1603
Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1)
no
0.52
14
GFF5810
Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA
no
0.51
15
GFF3219
hypothetical protein
no
0.51
16
GFF2838
hypothetical protein
no
0.50
17
GFF6009
Acyl-CoA dehydrogenase STM0857
no
0.50
18
GFF4672
Exoenzymes regulatory protein AepA precursor
no
0.49
19
GFF6657
Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system
no
0.49
20
GFF442
hypothetical transporter PduT for various metalloporphyrins
no
0.49
Or look for
negative cofitness