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  • Top cofit genes for GFF4291 from Variovorax sp. SCN45

    Putative oxidoreductase YncB
    SEED: Putative oxidoreductase YncB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.61
    2 GFF2772 Site-specific tyrosine recombinase XerD no 0.58
    3 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.55
    4 GFF2196 no description no 0.55
    5 GFF1702 hypothetical protein no 0.54
    6 GFF2594 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.53
    7 GFF4814 Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism no 0.53
    8 GFF2405 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.52
    9 GFF2437 hypothetical protein no 0.52
    10 GFF653 no description no 0.52
    11 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) no 0.52
    12 GFF6554 Putative ATP/GTP-binding protein no 0.52
    13 GFF1603 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.52
    14 GFF5810 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA no 0.51
    15 GFF3219 hypothetical protein no 0.51
    16 GFF2838 hypothetical protein no 0.50
    17 GFF6009 Acyl-CoA dehydrogenase STM0857 no 0.50
    18 GFF4672 Exoenzymes regulatory protein AepA precursor no 0.49
    19 GFF6657 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system no 0.49
    20 GFF442 hypothetical transporter PduT for various metalloporphyrins no 0.49

    Or look for negative cofitness