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  • Top cofit genes for GFF4288 from Variovorax sp. SCN45

    Acyl-CoA dehydrogenase
    SEED: Butyryl-CoA dehydrogenase (EC 1.3.99.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) no 0.71
    2 GFF1135 hypothetical protein no 0.70
    3 GFF4277 Small subunit naph/bph dioxygenase no 0.69
    4 GFF3525 Protein tyrosine/serine phosphatase no 0.67
    5 GFF3466 FIG00932805: hypothetical protein no 0.67
    6 GFF1829 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) no 0.66
    7 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.66
    8 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.65
    9 GFF2367 Transcriptional regulator, LysR family no 0.64
    10 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system no 0.63
    11 GFF3309 Beta-hexosaminidase (EC 3.2.1.52) no 0.60
    12 GFF1390 ortholog of Bordetella pertussis (BX470248) BP2750 no 0.60
    13 GFF6107 Zinc transporter, ZIP family 0.41 0.60
    14 GFF438 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) no 0.60
    15 GFF789 protease Do no 0.59
    16 GFF5640 Putative formate dehydrogenase oxidoreductase protein no 0.59
    17 GFF3607 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.58
    18 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.58
    19 GFF4208 BUG/TctC family periplasmic protein no 0.58
    20 GFF2968 MaoC-like dehydratase no 0.58

    Or look for negative cofitness