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  • Top cofit genes for PS417_21935 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: LysR-family transcriptional regulator STM3020

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08065 ABC transporter permease 0.33 0.21
    2 PS417_04925 MFS transporter 0.33 0.21
    3 PS417_08830 membrane protein no 0.21
    4 PS417_12145 acetoacetyl-CoA synthetase no 0.20
    5 PS417_02180 proline:sodium symporter PutP 0.27 0.20
    6 PS417_23745 hypothetical protein no 0.20
    7 PS417_08340 type IV secretion protein Rhs no 0.20
    8 PS417_24755 phosphoesterase no 0.19
    9 PS417_06095 energy transducer TonB no 0.18
    10 PS417_12280 MerR family transcriptional regulator no 0.18
    11 PS417_24655 hypothetical protein 0.29 0.18
    12 PS417_00590 5S ribosomal RNA no 0.18
    13 PS417_27055 hypothetical protein no 0.18
    14 PS417_11185 dimethylallyltransferase no 0.17
    15 PS417_24815 ethanolamine transporter 0.25 0.17
    16 PS417_26895 phosphorylcholine phosphatase no 0.17
    17 PS417_08745 hypothetical protein no 0.17
    18 PS417_02855 histidinol phosphatase no 0.17
    19 PS417_13455 alkaline proteinase inhibitor no 0.16
    20 PS417_15960 multidrug transporter 0.55 0.16

    Or look for negative cofitness