Top cofit genes for GFF4279 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

protein iraP
SEED: protein iraP

Rank Hit Name Description Conserved? Cofitness  
1 GFF3862 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) no 0.59
2 GFF4192 DNA-binding protein HU-alpha 0.41 0.57
3 GFF2967 ClpXP protease specificity-enhancing factor / Stringent starvation protein B no 0.54
4 GFF4282 Protein YaiC no 0.52
5 GFF238 Protein of unknown function DUF484 0.41 0.52
6 GFF3257 hemimethylated DNA binding protein YccV no 0.52
7 GFF4276 D-alanine--D-alanine ligase A (EC 6.3.2.4) no 0.52
8 GFF4356 DNA-binding protein HU-beta 0.37 0.51
9 GFF4812 CRISPR-associated protein, Cse4 family no 0.51
10 GFF4837 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 no 0.49
11 GFF745 Deoxyribose operon repressor, DeoR family no 0.48
12 GFF749 Putative transport protein/putative regulator no 0.48
13 GFF906 FIG01047835: hypothetical protein no 0.48
14 GFF4286 Shikimate kinase III (EC 2.7.1.71) no 0.48
15 GFF3533 FIG00638687: hypothetical protein no 0.47
16 GFF1446 Putative Na(+)/H(+) exchanger protein, CPA1 family precursor no 0.47
17 GFF418 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component no 0.46
18 GFF3887 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) no 0.46
19 GFF3968 Cobalamin synthase (EC 2.7.8.26) no 0.46
20 GFF3475 Transcriptional regulator no 0.46

Or look for negative cofitness