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Cofit
Protein
Homologs
Top cofit genes for PS417_21875 from
Pseudomonas simiae WCS417
AraC family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_10320
hypothetical protein
no
0.22
2
PS417
_13165
peroxidase
no
0.20
3
PS417
_12290
sulfite reductase
0.33
0.20
4
PS417
_07200
LysR family transcriptional regulator
no
0.20
5
PS417
_16465
sirohydrochlorin ferrochelatase
0.35
0.19
6
PS417
_07400
hypothetical protein
no
0.19
7
PS417
_00820
hypothetical protein
no
0.18
8
PS417
_21360
termination factor Rho
no
0.18
9
PS417
_23110
2-isopropylmalate synthase
0.37
0.18
10
PS417
_18585
3-isopropylmalate dehydrogenase
0.38
0.17
11
PS417
_00295
hypothetical protein
no
0.17
12
PS417
_11510
AraC family transcriptional regulator
no
0.17
13
PS417
_26995
phosphoserine phosphatase
0.38
0.17
14
PS417
_26740
homoserine acetyltransferase
0.37
0.17
15
PS417
_12855
3-phosphoshikimate 1-carboxyvinyltransferase
no
0.17
16
PS417
_09480
peptidase M24
no
0.16
17
PS417
_04415
ATP phosphoribosyltransferase (EC 2.4.2.17)
(from data)
0.36
0.16
18
PS417
_01855
phosphoribosyl-AMP cyclohydrolase
0.33
0.16
19
PS417
_26565
LysR family transcriptional regulator
no
0.16
20
PS417
_15855
universal stress protein
no
0.16
Or look for
negative cofitness