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  • Top cofit genes for GFF4268 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Permeases of the major facilitator superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2778 Fosmidomycin resistance protein no 0.55
    2 GFF234 Protein QmcA (possibly involved in integral membrane quality control) 0.39 0.52
    3 GFF6615 putative plasmid stabilization protein no 0.52
    4 GFF4570 Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) no 0.51
    5 GFF4023 no description no 0.50
    6 GFF4501 Transcriptional regulator, LysR family no 0.49
    7 GFF5243 General secretion pathway protein H no 0.49
    8 GFF3084 no description no 0.48
    9 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.48
    10 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) no 0.48
    11 GFF1838 Manganese transport protein MntH no 0.47
    12 GFF3936 no description no 0.47
    13 GFF1600 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.47
    14 GFF1823 Mg(2+)-transport-ATPase-associated protein MgtC no 0.46
    15 GFF3816 hypothetical protein no 0.46
    16 GFF3698 ATP-dependent, 3'-5' DNA helicase with strand annealing activity no 0.45
    17 GFF6522 Zinc-regulated outer membrane receptor 0.38 0.45
    18 GFF4802 Osmotically-inducible lipoprotein OsmB no 0.45
    19 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.35 0.44
    20 GFF3771 no description no 0.44

    Or look for negative cofitness