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  • Top cofit genes for GFF4264 from Variovorax sp. SCN45

    surface antigen gene
    SEED: surface antigen gene

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4485 FIG00715336: hypothetical protein no 0.61
    2 GFF2379 Serine/threonine protein kinase no 0.59
    3 GFF6003 no description no 0.59
    4 GFF2151 twitching motility protein PilG no 0.58
    5 GFF5145 hypothetical protein no 0.56
    6 GFF3718 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB (EC 3.5.1.110) no 0.56
    7 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) no 0.56
    8 GFF183 Virulence protein no 0.56
    9 GFF2154 twitching motility protein PilJ no 0.56
    10 GFF3153 Two-component transcriptional response regulator, LuxR family no 0.56
    11 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.56
    12 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.55
    13 GFF2510 Type IV fimbrial assembly, ATPase PilB no 0.55
    14 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.55
    15 GFF1232 Uncharacterized protein conserved in bacteria no 0.55
    16 GFF5117 Transcriptional regulator, LysR family no 0.55
    17 GFF5323 Type IV pilus biogenesis protein PilQ no 0.54
    18 GFF5414 hypothetical protein no 0.54
    19 GFF5319 Type IV pilus biogenesis protein PilM no 0.54
    20 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.54

    Or look for negative cofitness