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  • Top cofit genes for GFF4263 from Variovorax sp. SCN45

    TonB-dependent siderophore receptor
    SEED: TonB-dependent siderophore receptor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6682 Efflux ABC transporter, permease protein no 0.45
    2 GFF6567 hypothetical protein no 0.45
    3 GFF4664 hypothetical protein no 0.45
    4 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.45
    5 GFF2473 hypothetical protein no 0.44
    6 GFF6741 UPF0053 inner membrane protein YoaE no 0.44
    7 GFF2940 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) no 0.44
    8 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor no 0.44
    9 GFF3992 HNH endonuclease family protein no 0.43
    10 GFF6219 hypothetical protein no 0.43
    11 GFF870 TonB-dependent receptor no 0.43
    12 GFF2263 putative membrane protein no 0.42
    13 GFF2955 hypothetical protein no 0.42
    14 GFF3828 hypothetical protein no 0.42
    15 GFF4540 hypothetical protein no 0.42
    16 GFF4706 Na(+) dependent transporter,Sodium Bile acid symporter family no 0.42
    17 GFF2200 sigma-54-dependent transcriptional regulator no 0.41
    18 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.40
    19 GFF6259 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI (EC 2.7.8.37) no 0.40
    20 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.39

    Or look for negative cofitness