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Cofit
Protein
Homologs
Top cofit genes for GFF4250 from
Variovorax sp. SCN45
Transcriptional regulator, AcrR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6675
ortholog of Bordetella pertussis (BX470248) BP3300
no
0.53
2
GFF7210
Hydroxymethylpyrimidine ABC transporter, transmembrane component
no
0.51
3
GFF4957
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.50
4
GFF6669
hypothetical protein
no
0.45
5
GFF923
Chromosome partition protein smc
no
0.45
6
GFF6974
no description
no
0.44
7
GFF7029
hypothetical protein
no
0.43
8
GFF4149
hypothetical protein
no
0.43
9
GFF4984
Tricarboxylate transport protein TctC
no
0.43
10
GFF1725
Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system
no
0.42
11
GFF6355
T6SS secretion lipoprotein TssJ (VasD)
no
0.41
12
GFF694
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
no
0.41
13
GFF5221
Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
no
0.40
14
GFF5202
hypothetical protein
no
0.38
15
GFF6092
Penicillin G acylase precursor (EC 3.5.1.11)
no
0.38
16
GFF7009
hypothetical protein
no
0.38
17
GFF2178
Methyl-accepting chemotaxis sensor/transducer protein
no
0.38
18
GFF467
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.37
19
GFF2642
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.37
20
GFF405
3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
no
0.37
Or look for
negative cofitness