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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF425 from
Hydrogenophaga sp. GW460-11-11-14-LB1
LysR-family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF748
Tricarboxylate transport protein TctB
no
0.66
2
GFF4422
Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26)
no
0.62
3
GFF434
3-dehydroquinate dehydratase II (EC 4.2.1.10)
no
0.59
4
GFF2167
NAD-dependent aldehyde dehydrogenases
no
0.59
5
GFF4396
FIG00957806: hypothetical protein
no
0.56
6
GFF5166
Type IV pilus biogenesis protein PilE
no
0.55
7
GFF2692
hypothetical protein
no
0.55
8
GFF479
Citronellol and citronellal dehydrogenase
no
0.54
9
GFF3476
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.54
10
GFF439
2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
no
0.54
11
GFF1872
Phenylalanyl-tRNA synthetase beta subunit
no
0.54
12
GFF842
FIG007317: Chromosome segregation protein SMC-like
no
0.53
13
GFF3315
FIG00932412: hypothetical protein
no
0.53
14
GFF4766
Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
no
0.53
15
GFF5610
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.52
16
GFF4151
FIG071147: hypothetical protein
no
0.52
17
GFF808
Bona fide RidA/YjgF/TdcF/RutC subgroup
no
0.51
18
GFF3379
putative integral membrane protein
no
0.50
19
GFF4744
Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)
no
0.50
20
GFF884
Acetoacetyl-CoA synthetase (EC 6.2.1.16)
no
0.50
Or look for
negative cofitness