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  • Top cofit genes for GFF4242 from Variovorax sp. SCN45

    TRAP-type C4-dicarboxylate transport system, periplasmic component
    SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1376 hypothetical protein no 0.67
    2 GFF994 Cytoskeleton protein RodZ no 0.64
    3 GFF4937 no description no 0.61
    4 GFF3753 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.60
    5 GFF5379 Putative hydrolase no 0.60
    6 GFF5649 Selenide,water dikinase (EC 2.7.9.3) no 0.60
    7 GFF4983 fumarate reductase/succinate dehydrogenase flavoprotein-like no 0.60
    8 GFF4909 Two-component transcriptional response regulator, OmpR family no 0.58
    9 GFF2103 Regulatory protein, LuxR:Tetratricopeptide TPR_4 no 0.58
    10 GFF312 FIG021862: membrane protein, exporter no 0.57
    11 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.57
    12 GFF557 Plectin 1 no 0.55
    13 GFF6392 hypothetical protein 0.76 0.55
    14 GFF6067 Permease of the drug/metabolite transporter (DMT) superfamily no 0.54
    15 GFF3407 MaoC domain protein no 0.54
    16 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.53
    17 GFF4423 Conjugative transfer protein TrbI no 0.53
    18 GFF6160 Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family no 0.53
    19 GFF6618 Mlr6156 protein no 0.51
    20 GFF4396 Mobile element protein no 0.51

    Or look for negative cofitness