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  • Top cofit genes for PS417_21725 from Pseudomonas simiae WCS417

    amino acid transporter
    SEED: Arginine/ornithine ABC transporter, ATP-binding protein AotP

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21700 arginine N-succinyltransferase 0.48 0.45
    2 PS417_21690 N-succinylarginine dihydrolase 0.64 0.38
    3 PS417_21705 arginine N-succinyltransferase 0.36 0.32
    4 PS417_06645 RNA polymerase-associated protein RapA 0.25 0.31
    5 PS417_28220 LysR family transcriptional regulator 0.32 0.27
    6 PS417_27835 endoribonuclease no 0.27
    7 PS417_18690 aromatic amino acid aminotransferase no 0.27
    8 PS417_19805 flagellar M-ring protein FliF no 0.26
    9 PS417_21730 peptidase M14 0.97 0.25
    10 PS417_21735 ABC transporter for L-Arginine, permease component 2 (from data) 0.99 0.25
    11 PS417_21390 hypothetical protein 0.15 0.24
    12 PS417_19795 flagellar assembly protein FliH 0.56 0.23
    13 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) 0.41 0.23
    14 PS417_18595 3-isopropylmalate dehydratase 0.27 0.23
    15 PS417_19740 flagellar biosynthesis protein flip no 0.23
    16 PS417_18590 SAM-dependent methyltransferase 0.60 0.23
    17 PS417_04005 ornithine decarboxylase no 0.23
    18 PS417_02510 ATP phosphoribosyltransferase regulatory subunit 0.27 0.22
    19 PS417_01850 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) 0.26 0.22
    20 PS417_01560 imidazoleglycerol-phosphate dehydratase 0.28 0.22

    Or look for negative cofitness