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Cofit
Protein
Homologs
Top cofit genes for GFF4240 from
Variovorax sp. SCN45
Integral membrane protein
SEED: FIG00975736: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6153
Transcriptional activator of acetoin/glycerol metabolism
no
0.55
2
GFF2346
no description
no
0.54
3
GFF6627
Mobile element protein
no
0.53
4
GFF6146
Phosphonoacetate hydrolase (EC 3.11.1.2)
no
0.51
5
GFF5898
FIG026291: Hypothetical periplasmic protein
no
0.50
6
GFF876
hypothetical protein
no
0.49
7
GFF3807
FIG00538552: hypothetical protein
no
0.49
8
GFF1397
TRAP-type C4-dicarboxylate transport system, large permease component
no
0.49
9
GFF5872
Inner membrane protein YbhQ
no
0.48
10
GFF397
NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136)
no
0.48
11
GFF2435
FIG138928: iron-regulated membrane protein
no
0.48
12
GFF2550
Dihydroneopterin triphosphate pyrophosphohydrolase type 2
no
0.48
13
GFF6984
RNA polymerase sigma factor for flagellar operon
no
0.47
14
GFF2232
Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174)
no
0.47
15
GFF335
Cytosine deaminase (EC 3.5.4.1)
no
0.47
16
GFF2263
putative membrane protein
no
0.47
17
GFF5657
Formate dehydrogenase O beta subunit (EC 1.2.1.2)
no
0.46
18
GFF5519
Transcriptional regulator
no
0.46
19
GFF5402
Transcriptional regulator, IclR family
no
0.46
20
GFF815
COGs COG3777
no
0.46
Or look for
negative cofitness