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  • Top cofit genes for GFF4229 from Variovorax sp. SCN45

    Transcriptional regulator
    SEED: Transcriptional regulator
    KEGG: transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2656 Acyltransferase 3 no 0.50
    2 GFF7138 ATP-dependent 23S rRNA helicase DbpA no 0.49
    3 GFF1789 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.48
    4 GFF5400 Demethylmenaquinone methyltransferase-like protein no 0.46
    5 GFF6407 Phytanoyl-CoA dioxygenase no 0.46
    6 GFF5139 no description no 0.46
    7 GFF6508 hypothetical protein no 0.46
    8 GFF74 Transcriptional regulator, LysR family no 0.45
    9 GFF1587 no description no 0.45
    10 GFF7032 no description no 0.44
    11 GFF6259 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI (EC 2.7.8.37) no 0.44
    12 GFF1037 putative membrane protein no 0.44
    13 GFF3175 Uncharacterized MFS-type transporter no 0.43
    14 GFF57 Putative polysaccharide export protein YccZ precursor no 0.43
    15 GFF5182 no description no 0.43
    16 GFF4274 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.43
    17 GFF5196 L-arabinose ABC transporter, permease protein AraH no 0.43
    18 GFF5760 Flagellar transcriptional activator FlhC no 0.42
    19 GFF2363 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52) no 0.42
    20 GFF7161 Transcriptional regulator, LysR family no 0.42

    Or look for negative cofitness