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  • Top cofit genes for PS417_21625 from Pseudomonas simiae WCS417

    DNA-binding protein
    SEED: Alginate biosynthesis transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02210 diguanylate cyclase 0.74 0.48
    2 PS417_05985 chemotaxis protein CheY 0.78 0.45
    3 PS417_21600 pilus assembly protein PilZ 0.45 0.40
    4 PS417_03930 thymidine phosphorylase no 0.39
    5 PS417_05975 chemotaxis protein CheW no 0.38
    6 PS417_19145 membrane protein 0.59 0.38
    7 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.37
    8 PS417_19635 lipid kinase no 0.35
    9 PS417_19625 histidine kinase no 0.35
    10 PS417_26520 amino acid ABC transporter substrate-binding protein 0.41 0.35
    11 PS417_21050 serine acetyltransferase 0.29 0.34
    12 PS417_20585 chemotaxis protein no 0.34
    13 PS417_22190 diguanylate cyclase 0.70 0.33
    14 PS417_06365 RNA polymerase sigma factor 0.33 0.33
    15 PS417_12825 MFS transporter no 0.33
    16 PS417_25775 lipoprotein no 0.32
    17 PS417_16160 ABC transporter substrate-binding protein no 0.32
    18 PS417_19630 LuxR family transcriptional regulator no 0.31
    19 PS417_12610 RNA polymerase sigma factor 0.65 0.31
    20 PS417_13425 cupin no 0.30

    Or look for negative cofitness