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  • Top cofit genes for GFF4216 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
    SEED: Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1767 no description no 0.62
    2 GFF17 hypothetical protein no 0.61
    3 GFF6653 Aminotransferase, class III no 0.59
    4 GFF4541 Uncharacterized protein conserved in bacteria no 0.58
    5 GFF4982 Thiol:disulfide interchange protein DsbC no 0.56
    6 GFF407 no description no 0.54
    7 GFF6175 hypothetical protein no 0.54
    8 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.53
    9 GFF4198 putative LuxA no 0.52
    10 GFF6489 no description no 0.51
    11 GFF647 Two-component system response regulator QseB no 0.51
    12 GFF896 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.50
    13 GFF6666 Transcriptional regulator protein no 0.50
    14 GFF1278 no description no 0.49
    15 GFF2248 Transcriptional regulatory protein RtcR no 0.49
    16 GFF1750 BUG/TctC family periplasmic protein no 0.49
    17 GFF3219 hypothetical protein no 0.49
    18 GFF5273 Various polyols ABC transporter, permease protein 1 no 0.48
    19 GFF556 no description no 0.48
    20 GFF373 Probable transmembrane protein no 0.48

    Or look for negative cofitness