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Cofit
Protein
Homologs
Top cofit genes for GFF421 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4567
Transcriptional regulator, LysR family
no
0.58
2
GFF5862
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.57
3
GFF2738
hypothetical protein
no
0.56
4
GFF5435
Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79), plant type
no
0.54
5
GFF2830
Uncharacterized protein CC_3061
no
0.54
6
GFF4372
ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
no
0.54
7
GFF7337
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.53
8
GFF2817
Probable proline-rich protein
no
0.52
9
GFF7373
CaiB/BaiF family protein
no
0.52
10
GFF3441
Hypothetical protein VC0266 (sugar utilization related?)
no
0.52
11
GFF7106
BUG/TctC family periplasmic protein
no
0.51
12
GFF3906
Acyl-CoA dehydrogenase
no
0.51
13
GFF5687
FIG01027591: hypothetical protein
no
0.51
14
GFF5329
SAM-dependent methyltransferase
no
0.50
15
GFF6612
y4eB gene in pNGR234a homolog
no
0.48
16
GFF5271
Transcriptional regulator, LysR family
no
0.48
17
GFF6608
hypothetical protein
no
0.48
18
GFF1368
BUG/TctC family periplasmic protein
no
0.48
19
GFF4801
DedA protein
no
0.48
20
GFF5356
Aldose 1-epimerase
no
0.47
Or look for
negative cofitness