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  • Top cofit genes for PS417_21515 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Transcriptional regulatory protein PhoP
    KEGG: two-component system, OmpR family, response regulator PhoP

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13805 4-amino-4-deoxy-L-arabinose transferase 0.79 0.79
    2 PS417_13820 UDP-glucose 6-dehydrogenase 0.78 0.76
    3 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase 0.80 0.75
    4 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.83 0.71
    5 PS417_14960 ATPase 0.89 0.69
    6 PS417_11825 transcriptional regulator no 0.61
    7 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase 0.78 0.61
    8 PS417_14965 transcriptional regulator 0.95 0.56
    9 PS417_04275 hypothetical protein 0.87 0.55
    10 PS417_07120 RNA polymerase sigma-H factor 0.90 0.55
    11 PS417_02145 potassium transporter KefA 0.38 0.55
    12 PS417_14945 beta-lactamase no 0.52
    13 PS417_05505 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.79 0.51
    14 PS417_05525 Fis family transcriptional regulator 0.72 0.51
    15 PS417_13780 integrase no 0.47
    16 PS417_24835 hypothetical protein 0.78 0.47
    17 PS417_17785 4-amino-4-deoxy-L-arabinose transferase no 0.46
    18 PS417_05520 histidine kinase 0.71 0.45
    19 PS417_13785 hypothetical protein 0.32 0.42
    20 PS417_22535 ornithine acetyltransferase 0.30 0.41

    Or look for negative cofitness