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Cofit
Protein
Homologs
Top cofit genes for GFF4200 from
Variovorax sp. SCN45
Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7099
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
no
0.57
2
GFF6475
hypothetical protein
no
0.55
3
GFF5254
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.54
4
GFF2005
Transcriptional regulator, AraC family
no
0.52
5
GFF5853
Type I secretion system ATPase, LssB family LapB
no
0.51
6
GFF2953
Transcriptional regulator, AraC family
no
0.51
7
GFF697
FIG074102: hypothetical protein
no
0.50
8
GFF5620
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.50
9
GFF3464
Urea ABC transporter, substrate-binding protein UrtA
no
0.48
10
GFF7012
Taurine ABC transporter, ATP-binding protein TauB
no
0.47
11
GFF3703
LemA family protein
no
0.46
12
GFF580
Rhodanese domain protein UPF0176, Betaproteobacterial subgroup
no
0.46
13
GFF5232
5'-nucleotidase (EC 3.1.3.5)
no
0.46
14
GFF6045
FIG00932121: hypothetical protein
no
0.46
15
GFF3795
Flagellar hook-length control protein FliK
no
0.45
16
GFF5218
ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.45
17
GFF2086
hypothetical protein
no
0.45
18
GFF2745
FIG074102: hypothetical protein
no
0.45
19
GFF6007
Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8)
no
0.45
20
GFF1513
Cytochrome c551/c552
no
0.44
Or look for
negative cofitness