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  • Top cofit genes for GFF420 from Variovorax sp. SCN45

    Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
    SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5865 Probable iron export permease protein FetB no 0.64
    2 GFF4902 hypothetical protein no 0.59
    3 GFF199 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA no 0.56
    4 GFF4191 BUG/TctC family periplasmic protein no 0.56
    5 GFF4261 RNA polymerase ECF-type sigma factor no 0.55
    6 GFF266 RND efflux system, inner membrane transporter no 0.54
    7 GFF794 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.53
    8 GFF6841 hypothetical protein no 0.53
    9 GFF6449 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) no 0.53
    10 GFF3659 Two-component transcriptional response regulator, OmpR family no 0.52
    11 GFF1355 Transcriptional regulator, LysR family no 0.52
    12 GFF6932 no description no 0.51
    13 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.51
    14 GFF3201 no description no 0.51
    15 GFF1219 SAM-dependent methyltransferase no 0.51
    16 GFF815 COGs COG3777 no 0.51
    17 GFF6139 Serine/threonine kinase no 0.51
    18 GFF7358 Phenylacetate ABC transporter, permease protein 2 no 0.51
    19 GFF1769 Urease accessory protein UreD no 0.50
    20 GFF6936 ABC transporter, ATP-binding protein no 0.50

    Or look for negative cofitness