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  • Top cofit genes for GFF42 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3085 no description no 0.66
    2 GFF5240 General secretion pathway protein K no 0.64
    3 GFF1470 Putative transposase InsK for insertion sequence element IS150 no 0.63
    4 GFF4337 Electron transfer flavoprotein, alpha subunit no 0.63
    5 GFF6204 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) no 0.57
    6 GFF7073 no description no 0.56
    7 GFF4680 tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200) no 0.55
    8 GFF2100 no description no 0.52
    9 GFF6684 ABC transporter, ATP-binding protein no 0.52
    10 GFF3344 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains no 0.52
    11 GFF3747 putative esterase no 0.51
    12 GFF1690 KEGG: DNA-binding protein H-NS no 0.50
    13 GFF5432 Glutathione S-transferase family protein no 0.50
    14 GFF5301 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.49
    15 GFF6475 hypothetical protein no 0.48
    16 GFF142 Oxidoreductase no 0.48
    17 GFF6865 Transcriptional regulator, Crp/Fnr family no 0.47
    18 GFF4788 Uncharacterized protein COG3236 no 0.47
    19 GFF6521 Auxin efflux carrier family protein no 0.47
    20 GFF179 D-mannonate oxidoreductase (EC 1.1.1.57) no 0.46

    Or look for negative cofitness